BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F08SP1|AL425736
(747 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig779 1450 0.0
>3x_Contig779
Length = 1685
Score = 1450 bits (728), Expect = 0.0
Identities = 736/742 (99%)
Strand = Plus / Minus
Query: 1 gatccgattcaaactgtgcattataagaatcaatagcttcttgagaagacgctagcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 gatccgattcaaactgtgcattataagaatcaatagcttcttgagaagacgctagcttct 839
Query: 61 gcagcctttcaaactcttcctggtcttcctttggtaatggtggtggacctgctcttcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 gcagcctttcaaactcttcctggtcttcctttggtaatggtggtggacctgctcttcttt 779
Query: 121 cttgaaatgttctaatttgattcaacctgacaaaggctggtcttagaccgactaatctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 cttgaaatgttctaatttgattcaacctgacaaaggctggtcttagaccgactaatctta 719
Query: 181 cactttgttttcttatactggaaagcatgtaggttgtatgttatagcggtaccttgttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 cactttgttttcttatactggaaagcatgtaggttgtatgttatagcggtaccttgttga 659
Query: 241 gagatgatctgcaaacgaagtctaaaagaaattatcaatatagatgaatgccatttacgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gagatgatctgcaaacgaagtctaaaagaaattatcaatatagatgaatgccatttacgc 599
Query: 301 agacagatatatattgtaaagatgatatatgtatgaagaatgawatatcatcgctttaaa 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 598 agacagatatatattgtaaagatgatatatgtatgaagaatgaaatatcatcgctttaaa 539
Query: 361 tcggggtgagaggataattcggtagtcatcggtgaaaagaaagaagacaggatgataaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tcggggtgagaggataattcggtagtcatcggtgaaaagaaagaagacaggatgataaat 479
Query: 421 taawagtcatgtgactgawatagaatattacccgggaaaacacagaaaactgtggcgtct 480
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 taaaagtcatgtgactgaaatagaatattacccgggaaaacacagaaaactgtggcgtct 419
Query: 481 agacaaaagawatatgattcacgtgacttatgagcaagaacctagaagggaacccaggat 540
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 418 agacaaaagaaatatgattcacgtgactgatgagcaagaacctagaagggaacccaggat 359
Query: 541 atgacaagagacacagtgttgcaggtattcaggtttatatcgcaccggttttccaatcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 atgacaagagacacagtgttgcaggtattcaggtttatatcgcaccggttttccaatcat 299
Query: 601 tcgtgatcgatttgawagcgaggtaatattgatggattggctgctatctggaccacctgt 660
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tcgtgatcgatttgaaagcgaggtaatattgatggattggctgctatctggaccacctgt 239
Query: 661 cgccattggggggaatctgatttttagtgtttgcattttgctgtttggtgatattttaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 cgccattggggggaatctgatttttagtgtttgcattttgctgtttggtgatattttaca 179
Query: 721 tgtatatatatacattgtcagg 742
||||||||||||||||||||||
Sbjct: 178 tgtatatatatacattgtcagg 157
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6387
Number of Sequences: 1807
Number of extensions: 6387
Number of successful extensions: 188
Number of sequences better than 1.0e-20: 1
length of query: 747
length of database: 10,358,551
effective HSP length: 16
effective length of query: 731
effective length of database: 10,329,639
effective search space: 7550966109
effective search space used: 7550966109
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)